PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn110081
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family bHLH
Protein Properties Length: 365aa    MW: 40722.7 Da    PI: 8.4603
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn110081genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.10.000751972173655
                 S-.STCHHHHHHHHHHHHHHH CS
         HLH  36 kK.lsKaeiLekAveYIksLq 55 
                 k  ++ a+iL  A+eYI  Lq
  Achn110081 197 KNlMDRASILGDAIEYIEALQ 217
                 446899*************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.106.7E-4199221IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF502493.48E-11298362IPR012340Nucleic acid-binding, OB-fold
Gene3DG3DSA:2.40.50.1401.2E-12303362IPR012340Nucleic acid-binding, OB-fold
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 365 aa     Download sequence    Send to blast
MTDLKFKNTI SLSSPWPPPN KSSKILLQAL LFEACSRTVN QIFKDQNLIE HVITRYKIIM  60
EQETITEQHD SGLILNVPPR DPLLGEHLTI WSHPIQDLNY FPRLPFLPPV SQPNHHRSFD  120
GSSIGSNPSN EQPSYNSGSI HLSRNGSVNE TIEKYPACKK SDSNGNLSSK KESGFLKGDS  180
NHLKPKQRIE WEPYHSKNLM DRASILGDAI EYIEALQKMV QVEVYQIGTK DFLLKLSCKH  240
KQGGFVRLME ALNSLGLQVI DANVSMYSGK VSNILKVEQE TCGSLILNFA EGMAEQKMKP  300
AAKIEQLRPL AEGLNLTVKV VSSKMIMPRG RDGNQGRQMR LAECLVGDET GIVVFTARND  360
QGLL*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA99292227
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G16910.14e-14bHLH family protein